.git_archival.txt
.gitattributes
.gitignore
.pre-commit-config.yaml
.readthedocs.yml
LICENSE
README.rst
pyproject.toml
requirements-dev.txt
requirements.txt
setup.cfg
setup.py
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/main.yml
.github/workflows/release.yml
docs/conf.py
docs/index.rst
docs/tips.rst
docs/JOSS/codemeta.json
docs/JOSS/generate.rb
docs/JOSS/paper.bib
docs/JOSS/paper.md
docs/figures/noisy_differentiation.png
examples/1_feature_overview.ipynb
examples/2_introduction_to_sindy.ipynb
examples/3_original_paper.ipynb
examples/4_scikit_learn_compatibility.ipynb
examples/5_differentation.ipynb
examples/6_deeptime_compatibility.ipynb
examples/7_plasma_example.ipynb
examples/README.rst
examples/data/PODcoefficients.mat
examples/data/PODcoefficients_run1.mat
examples/data/plasmaphysics_example_singularValues.txt
examples/data/plasmaphysics_example_trajectories.txt
pysindy/__init__.py
pysindy/pysindy.py
pysindy.egg-info/PKG-INFO
pysindy.egg-info/SOURCES.txt
pysindy.egg-info/dependency_links.txt
pysindy.egg-info/requires.txt
pysindy.egg-info/top_level.txt
pysindy/deeptime/__init__.py
pysindy/deeptime/deeptime.py
pysindy/differentiation/__init__.py
pysindy/differentiation/base.py
pysindy/differentiation/finite_difference.py
pysindy/differentiation/sindy_derivative.py
pysindy/differentiation/smoothed_finite_difference.py
pysindy/feature_library/__init__.py
pysindy/feature_library/base.py
pysindy/feature_library/custom_library.py
pysindy/feature_library/fourier_library.py
pysindy/feature_library/identity_library.py
pysindy/feature_library/polynomial_library.py
pysindy/optimizers/__init__.py
pysindy/optimizers/base.py
pysindy/optimizers/constrained_sr3.py
pysindy/optimizers/sindy_optimizer.py
pysindy/optimizers/sr3.py
pysindy/optimizers/stlsq.py
pysindy/utils/__init__.py
pysindy/utils/base.py
test/conftest.py
test/test_pysindy.py
test/test_sindyc.py
test/deeptime/test_scikit_time.py
test/differentiation/test_differentiation_methods.py
test/feature_library/test_feature_library.py
test/optimizers/test_optimizers.py
test/property_tests/test_optimizers_complexity.py
test/utils/test_utils.py